Genomics History & Milestones
1985
May 24-26 Read Dr. Sinsheimer’s account of the Santa Cruz Workshop and hear Dr. Harry Noller speak about the episode, as told to the UCSC Institute of the Arts and Sciences (IAS)’s Collective Museum.
1989
June David Deamer conceives nanopore DNA sequencing.
1990
October International Human Genome Project launches with the goal of reaching a significant milestone: a complete human genome sequence by 2005.
Pictured: The first printout of the human genome to be presented as a series of books, displayed at the Wellcome Collection, London (Wikipedia)
2000
June 22 Jim Kent assembles the human genome sequence using his 10,000-line computer program.
September Launch of the UC Santa Cruz Genome Browser.
2001
January Copy of first draft of the human genome sequence presented to President Clinton and deposited in the Smithsonian.
February Publication of the human genome sequence in Nature.
June 19 Genome scientists gathered at Beyond Genome 2001 in San Francisco hear David Haussler’s brief history of the human genome. Wired reports that “Thanks to Jim Kent, a UC-Santa Cruz student now hailed as a genome hero, a partial assembly was completed with no time to spare…” However, “the assembly phase is still not finished and it seems to be a more difficult task than expected.” In light of the difficulty, researchers met last week “to discuss this problematic phase and compare each of their efforts.”
The Symposium included a scientific workshop and a public forum. Panelists at the forum were Francis Collins, director of the National Human Genome Research Institute; Robert Sinsheimer, chancellor emeritus and professor emeritus of biology, UC Santa Cruz; Gene Myers, vice-president of informatics research, Celera Genomics; and Mary-Claire King, professor of Medicine and Genetics, University of Washington. The moderator was Richard Harris, science reporter for National Public Radio and an alumnus of UCSC. The video and panel discussion recordings are available online.
December 15 On the final round of Jeopardy that aired December 15th, 2000 under the category “Science News,” the answer was “Made available for download by scientists at the University of California at Santa Cruz, the 739MB file of this project consists of A’s, T’s, G’s and C’s.” All three contestants, including a cooking instructor from Chicago and a school teacher from Mississippi, knew the question was “What is the Human Genome Project?”
2003
UCSC Genome Bioinformatics Group With the human genome sequence available, comparable genome browser projects spring up, most notably those at the National Center for Biotechnology Information (NCBI), and at the European Bioinformatics Institute (EBI), leading to friendly competition that sharpens efforts on all sides. In addition to the human genome browser, the UCSC group and collaborators develop browsers for other species, allowing comparative genomics studies — comparative study that elucidates our own origins.
2004
May Genomics Institute publishes findings about ultra-conserved elements in the human genome that have remained unchanged through long periods of evolutionary history—one of Science magazine’s breakthroughs of the year.
2008
October Josh Stuart and David Haussler join the NIH’s Cancer Genome Atlas Project.
2009
March UCSC Cancer Genomics Browser makes its historic debut, built on the UCSC Genomics Browser platform and capable of visualizing data from cancer clinical trials.
April An international team of collaborators, including David Haussler, launch the Genome 10K project to reach the milestone of sequencing the genomes of 10,000 vertebrate species. The initiative is funded in part by the first-ever grant from the UC Santa Cruz Foundation Board Opportunity Fund (BOF).
2010
May Ed Green and colleagues publish the Neanderthal genome sequence.
2012
May Opening of the Cancer Genomics Hub (CG Hub) database at UC Santa Cruz.
2013
2015
April Beth Shapiro publishes How to Clone a Mammoth: The Science of De-Extinction; CALeDNA project launched.
2016
April 4 BRCA Exchange opens with Internet access to genetic variants in most important breast cancer gene.
July St. Baldrick’s Foundation funds Treehouse Childhood Cancer Initiative with $2.5 million grant.
2017
July Chan-Zuckerberg Initiative funds Benedict Paten and Jim Kent to build data platform for Human Cell Atlas.
2018
January Nature publishes first human genome sequenced with nanopore technology.
April Ed Green’s DNA forensic analysis cracks the Golden State Killer case.
November Schmidt Family Foundation funds Braingeneers project at UCSC/UCSF.
2019
September Launch of the Human Pangenome Project led by UC Santa Cruz.